Matrices@CSB.DB: E.coli Matrix Information Page
This page provides background information about the Escherichia coli gene expression data matrices which are the basis for the co-response analyses. For further information about particular experiments follow the given link.
To get information of your choice for the Escherichia coli gene expression data matrices use the links listed below.
Escherichia coli - Expression Data Matrix asap96a (m96a): ProcessingTranscript profiles of Matrix asap96a (m96A) were derived from the ASAP database (Glasner et al., 2003) and originated from oligonucleotide microarray technology (Affymetrix). The transcript profiling experiments of asap96a (m96A) covered miscellaneous stress treatments, application of antibiotics, comparison of media and growth conditions, as well as characterisation of mutants (Allen et al., 2003). Profiles were normalized and log base 2 transformed. Matrix asap96a (m96A) comprised 16 experiments, which were described by 4345 genes (Steinhauser et al., 2004a). Normalised transcript intensities were log base 2 transformed. Co-Response analyses were performed on range normalised (genes) matrix. For detailed description of the experiments please query the ASAP database. Escherichia coli - Expression Data Matrix asap96a (m96A): Experiment ListFor detailed description of the experiments please query the ASAP database.
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